PPGR - Gene Detail

Basic Information

Gene ID	JhiChr16G10002.g View in Genome Browser
Position	chr16:33323-40044 (-) 6721bp
Gene Type	gene
Gene Description (Protein Product)	May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays
Organism	Juglans hindsii
Also AS	AT5G23430

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JhiChr16G11042.g DENN domain and WD repeat-containing protein SCD1

JhiChr16G10217.g F-box-like WD repeat-containing protein

JhiChr16G10948.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Regulatory gene

JhiChr01G10098.g AP2-like ethylene-responsive transcription factor

JhiChr01G10099.g transcription factor

JhiChr01G10102.g transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000151	ubiquitin ligase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0031461	cullin-RING ubiquitin ligase complex	CC
GO:0032991	protein-containing complex	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	CC
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC