PPGR - Gene Detail

Basic Information

Gene ID	JhiChr16G10296.g View in Genome Browser
Position	chr16:3358038-3364516 (+) 6478bp
Gene Type	gene
Gene Description (Protein Product)	Protein ROOT INITIATION DEFECTIVE 3
Organism	Juglans hindsii
Also AS	AT3G49180

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JhiChr16G11042.g DENN domain and WD repeat-containing protein SCD1

JhiChr16G10949.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

JhiChr16G10948.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Regulatory gene

JhiChr01G10098.g AP2-like ethylene-responsive transcription factor

JhiChr01G10471.g Zinc finger protein

JhiChr01G10507.g AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000151	ubiquitin ligase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0008150	biological_process	BP
GO:0031461	cullin-RING ubiquitin ligase complex	CC
GO:0032991	protein-containing complex	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048509	regulation of meristem development	BP
GO:0048519	negative regulation of biological process	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0051093	negative regulation of developmental process	BP
GO:0065007	biological regulation	BP
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	CC
GO:1902183	regulation of shoot apical meristem development	BP
GO:1902184	negative regulation of shoot apical meristem development	BP
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC