Basic Information
Gene ID
JhiChr16G11338.g
Position
chr16:18637066-18642219 (-)
5153bp
Gene Type
gene
Gene Description (Protein Product)
U3 small nucleolar RNA-associated protein
Organism
Also AS AT4G04940

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JhiChr16G11423.g 116 kDa U5 small nuclear ribonucleoprotein
JhiChr16G11386.g Calcineurin-like metallo-phosphoesterase superfamily protein
JhiChr16G11389.g Protein of unknown function (DUF1068)
Regulatory gene
JhiChr05G10706.g Protein BASIC PENTACYSTEINE4-like
JhiChr06G10857.g Protein BASIC PENTACYSTEINE2-like
JhiChr06G10933.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.