Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JmaChr11G12364.g
View in Genome Browser
Position
chr11:32114245-32116961 (+)
2716bp
Gene Type
gene
Gene Description (Protein Product)
Protein CUP-SHAPED COTYLEDON 2-like
Organism
Juglans mandshurica
Also AS AT5G53950

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmaChr13G10023.g Protein TRANSPARENT TESTA 1-like
JmaChr14G11085.g Protein TRANSPARENT TESTA 1-like
JmaChr13G12011.g Protein TRANSPARENT TESTA 1-like
Regulatory gene
JmaChr01G10033.g dof zinc finger protein
JmaChr01G10419.g AP2-like ethylene-responsive transcription factor
JmaChr01G10665.g Transcription factor
Target gene
JmaChr01G10003.g
JmaChr01G10018.g DEAD-box ATP-dependent RNA helicase
JmaChr01G10022.g FLX-like 3

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001763 morphogenesis of a branching structure BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009933 meristem structural organization BP
GO:0010014 meristem initiation BP
GO:0010016 shoot system morphogenesis BP
GO:0010072 primary shoot apical meristem specification BP
GO:0010154 fruit development BP
GO:0010223 secondary shoot formation BP
GO:0010346 shoot axis formation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040034 regulation of development, heterochronic BP
GO:0048316 seed development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048507 meristem development BP
GO:0048508 embryonic meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048859 formation of anatomical boundary BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0090421 embryonic meristem initiation BP
GO:0090691 formation of plant organ boundary BP
GO:0090709 regulation of timing of plant organ formation BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905393 plant organ formation BP
GO:1905428 regulation of plant organ formation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP