Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JmaChr11G12420.g
View in Genome Browser
Position
chr11:32575028-32581491 (+)
6463bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the CTL (choline transporter-like) family
Organism
Juglans mandshurica
Also AS AT3G15380

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmaChr13G12103.g callose synthase
JmaChr14G11157.g Callose synthase
JmaChr12G10025.g plasmodesmata callose-binding protein
Regulatory gene
JmaChr01G10033.g dof zinc finger protein
JmaChr01G10242.g Tesmin/TSO1-like CXC domain
JmaChr01G10745.g Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000139 Golgi membrane CC
GO:0000325 plant-type vacuole CC
GO:0001558 regulation of cell growth BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005326 neurotransmitter transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006836 neurotransmitter transport BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008519 ammonium transmembrane transporter activity MF
GO:0009505 plant-type cell wall CC
GO:0009506 plasmodesma CC
GO:0009524 phragmoplast CC
GO:0009551 secondary plasmodesma CC
GO:0009663 plasmodesma organization BP
GO:0009705 plant-type vacuole membrane CC
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010051 xylem and phloem pattern formation BP
GO:0010065 primary meristem tissue development BP
GO:0010067 procambium histogenesis BP
GO:0010087 phloem or xylem histogenesis BP
GO:0010088 phloem development BP
GO:0010154 fruit development BP
GO:0010496 intercellular transport BP
GO:0010497 plasmodesmata-mediated intercellular transport BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015101 organic cation transmembrane transporter activity MF
GO:0015220 choline transmembrane transporter activity MF
GO:0015695 organic cation transport BP
GO:0015696 ammonium transmembrane transport BP
GO:0015833 peptide transport BP
GO:0015871 choline transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0022622 root system development BP
GO:0022857 transmembrane transporter activity MF
GO:0030054 cell junction CC
GO:0030100 regulation of endocytosis BP
GO:0030154 cell differentiation BP
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031901 early endosome membrane CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032588 trans-Golgi network membrane CC
GO:0032879 regulation of localization BP
GO:0033036 macromolecule localization BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0034330 cell junction organization BP
GO:0040008 regulation of growth BP
GO:0042592 homeostatic process BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044426 obsolete cell wall part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044462 obsolete external encapsulating structure part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0045216 cell-cell junction organization BP
GO:0048316 seed development BP
GO:0048364 root development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048507 meristem development BP
GO:0048508 embryonic meristem development BP
GO:0048608 reproductive structure development BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0051049 regulation of transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0055044 symplast CC
GO:0055085 transmembrane transport BP
GO:0055088 lipid homeostasis BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072488 ammonium transmembrane transport BP
GO:0090603 sieve element differentiation BP
GO:0097218 sieve plate CC
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:0099402 plant organ development BP
GO:2000012 regulation of auxin polar transport BP