PPGR - Gene Detail

Basic Information

Gene ID	JmaChr13G10131.g View in Genome Browser
Position	chr13:1145790-1148401 (+) 2611bp
Gene Type	gene
Gene Description (Protein Product)	Annexin D4-like
Organism	Juglans mandshurica
Also AS	AT2G38750

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JmaChr13G11346.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

JmaChr15G12067.g Nucleoporin

JmaChr15G11211.g Guanine nucleotide-binding protein alpha-1

Regulatory gene

JmaChr01G10093.g GATA transcription factor

JmaChr01G10104.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

JmaChr01G10193.g Transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003729	mRNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005911	cell-cell junction	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009408	response to heat	BP
GO:0009409	response to cold	BP
GO:0009414	response to water deprivation	BP
GO:0009415	response to water	BP
GO:0009506	plasmodesma	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009651	response to salt stress	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0030054	cell junction	CC
GO:0033993	response to lipid	BP
GO:0042221	response to chemical	BP
GO:0050896	response to stimulus	BP
GO:0055044	symplast	CC
GO:0097159	organic cyclic compound binding	MF
GO:0097305	response to alcohol	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901700	response to oxygen-containing compound	BP