Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JmaChr13G11794.g
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Position
chr13:21202403-21207500 (-)
5097bp
Gene Type
gene
Gene Description (Protein Product)
SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
Organism
Juglans mandshurica
Also AS AT5G22750

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmaChr14G10215.g This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
JmaChr16G11070.g Belongs to the 14-3-3 family
JmaChr14G10309.g Belongs to the ubiquitin-conjugating enzyme family
Regulatory gene
JmaChr01G10242.g Tesmin/TSO1-like CXC domain
JmaChr01G12417.g B3 domain-containing protein
JmaChr01G12865.g B3 domain-containing transcription factor VRN1-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000724 double-strand break repair via homologous recombination BP
GO:0000725 recombinational repair BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006302 double-strand break repair BP
GO:0006310 DNA recombination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009292 horizontal gene transfer BP
GO:0009294 DNA-mediated transformation BP
GO:0009987 cellular process BP
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044764 obsolete multi-organism cellular process BP
GO:0045003 double-strand break repair via synthesis-dependent strand annealing BP
GO:0046483 heterocycle metabolic process BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP