PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	JmaChr14G10884.g View in Genome Browser
Position	chr14:17244738-17246265 (+) 1527bp
Gene Type	gene
Gene Description (Protein Product)	Threonine dehydratase biosynthetic
Organism	Juglans mandshurica
Also AS	AT3G10050

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	JmaChr15G10264.g 2-oxoisovalerate dehydrogenase subunit alpha JmaChr15G11065.g Homocysteine s-methyltransferase JmaChr15G10452.g Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Regulatory gene	JmaChr01G10033.g dof zinc finger protein JmaChr01G10242.g Tesmin/TSO1-like CXC domain JmaChr01G10745.g Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00290	Valine, leucine and isoleucine biosynthesis	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].