Basic Information
Gene ID
JmaChr14G11664.g
Position
chr14:3974357-3979092 (-)
4735bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear pore complex protein
Organism
Also AS AT3G10650

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmaChr15G10001.g zinc finger CCCH domain-containing protein
JmaChr14G11777.g Nuclear pore complex protein
JmaChr16G10871.g Nuclear-pore
Regulatory gene
JmaChr01G10349.g ethylene-responsive transcription factor
JmaChr01G10363.g Ethylene-responsive transcription factor
JmaChr01G10925.g Ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.