Basic Information
Gene ID
JmiChr006G10218.g
Position
chr06:3083540-3086361 (-)
2821bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin-like superfamily protein
Organism
Also AS AT1G68185

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmiChr12G10423.g rnps1,sr45
JmiChr15G11432.g Nuclear-pore
JmiChr16G10923.g Nuclear-pore anchor
Regulatory gene
JmiChr005G10717.g Protein BASIC PENTACYSTEINE4-like
JmiChr005G11660.g Protein BASIC PENTACYSTEINE2-like
JmiChr006G10814.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.