Basic Information
Gene ID
JmiChr007G11585.g
Position
chr07:23240323-23245654 (-)
5331bp
Gene Type
gene
Gene Description (Protein Product)
pre-mRNA-splicing factor
Organism
Also AS AT1G02840

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmiChr15G11799.g Pre-mRNA-splicing factor
JmiChr16G11003.g Pre-mRNA-splicing factor
JmiChr008G11553.g RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Regulatory gene
JmiChr001G10001.g MYB-CC type transfactor, LHEQLE motif
JmiChr001G10086.g Zinc-finger homeodomain protein
JmiChr001G10108.g atrl6,rl6,rsm3

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.