Basic Information
Gene ID
JmiChr13G10122.g
Position
chr13:907096-919553 (+)
12457bp
Gene Type
gene
Gene Description (Protein Product)
Intron-binding protein
Organism
Also AS AT2G38770

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmiChr16G11062.g pre-mRNA-splicing factor SPF27 homolog
JmiChr15G11891.g pre-mRNA-splicing factor SPF27 homolog
JmiChr16G11399.g 116 kDa U5 small nuclear ribonucleoprotein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.