Basic Information
Gene ID
JmiChr13G11716.g
Position
chr13:20959672-20960499 (-)
827bp
Gene Type
gene
Gene Description (Protein Product)
Small nuclear ribonucleoprotein-associated protein
Organism
Also AS AT4G20440

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JmiChr13G11952.g U6 snRNA-associated Sm-like protein LSm8
JmiChr14G11457.g Splicing factor 3B subunit 6-like protein
JmiChr13G11850.g Nuclear cap-binding protein subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.