Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr1.1032.g
View in Genome Browser
Position
Chr1:9100173-9106375 (+)
6202bp
Gene Type
gene
Gene Description (Protein Product)
START domain
Organism
Juglans nigra
Also AS AT4G00730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr11.1119.g phosphatidylethanolamine binding
Juni_Chr6.421_Juni_Chr6.422.g Protein EARLY FLOWERING
Juni_Chr7.2804.g Protein EARLY FLOWERING
Regulatory gene
Juni_Chr11.1944.g Protein BASIC PENTACYSTEINE6-like
Juni_Chr13.1575.g SNW SKI-interacting
Juni_Chr13.1579.g Protein BASIC PENTACYSTEINE2-like
Target gene
Juni_Chr1.1013.g two-component response regulator
Juni_Chr1.1017.g BAG family molecular chaperone regulator
Juni_Chr1.1031.g Inactive rhomboid protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006349 regulation of gene expression by genomic imprinting BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009664 plant-type cell wall organization BP
GO:0009827 plant-type cell wall modification BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009909 regulation of flower development BP
GO:0009911 positive regulation of flower development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0016043 cellular component organization BP
GO:0016458 obsolete gene silencing BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0031047 RNA-mediated gene silencing BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0040029 epigenetic regulation of gene expression BP
GO:0042335 cuticle development BP
GO:0042545 cell wall modification BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043473 pigmentation BP
GO:0043476 pigment accumulation BP
GO:0043478 pigment accumulation in response to UV light BP
GO:0043479 pigment accumulation in tissues in response to UV light BP
GO:0043480 pigment accumulation in tissues BP
GO:0043481 anthocyanin accumulation in tissues in response to UV light BP
GO:0043565 sequence-specific DNA binding MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0046483 heterocycle metabolic process BP
GO:0046983 protein dimerization activity MF
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048582 positive regulation of post-embryonic development BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051094 positive regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071514 genomic imprinting BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0097159 organic cyclic compound binding MF
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905392 plant organ morphogenesis BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP