PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Juni_Chr1.1059.g View in Genome Browser
Position	Chr1:9426894-9437534 (+) 10640bp
Gene Type	gene
Gene Description (Protein Product)	O-glucosyltransferase rumi homolog
Organism	Juglans nigra
Also AS	AT5G23850

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Juni_Chr1.1793.g Protein of unknown function (DUF789) Juni_Chr7.3530.g Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway Juni_Chr2.2248.g Belongs to the yippee family
Regulatory gene	Juni_Chr1.1051.g transcription factor Juni_Chr1.1052.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains Juni_Chr1.1079.g MYB family transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map00514	Other types of O-glycan biosynthesis	O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].