PPGR - Gene Detail

Basic Information

Gene ID	Juni_Chr12.2026.g View in Genome Browser
Position	Chr12:27166717-27207100 (+) 40383bp
Gene Type	gene
Gene Description (Protein Product)	BEACH domain-containing protein
Organism	Juglans nigra
Also AS	AT2G45540

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Juni_Chr3.897.g Ubiquitin family

Juni_Chr3.2106.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Juni_Chr9.1584.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

Juni_Chr1.180.g Agamous-like MADS-box protein AGL12

Juni_Chr1.186.g Agamous-like MADS-box protein

Juni_Chr1.243.g Cyclic dof factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005911	cell-cell junction	CC
GO:0009506	plasmodesma	CC
GO:0012505	endomembrane system	CC
GO:0030054	cell junction	CC
GO:0044464	obsolete cell part	CC
GO:0055044	symplast	CC