Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr16.449.g
View in Genome Browser
Position
Chr16:6116600-6120478 (+)
3878bp
Gene Type
gene
Gene Description (Protein Product)
Protein TRANSPARENT TESTA GLABRA
Organism
Juglans nigra
Also AS AT5G24520

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr4.2259.g assists the folding of proteins upon ATP hydrolysis
Juni_Chr3.19.g assists the folding of proteins upon ATP hydrolysis
Juni_Chr7.428.g GLABRA2 expression modulator-like
Regulatory gene
Juni_Chr1.103.g General transcription factor 3C polypeptide
Juni_Chr1.1051.g transcription factor
Juni_Chr1.1052.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001708 cell fate specification BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0008544 epidermis development BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009888 tissue development BP
GO:0009913 epidermal cell differentiation BP
GO:0009957 epidermal cell fate specification BP
GO:0009987 cellular process BP
GO:0010026 trichome differentiation BP
GO:0010033 response to organic substance BP
GO:0030154 cell differentiation BP
GO:0030855 epithelial cell differentiation BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045165 cell fate commitment BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0060429 epithelium development BP
GO:0065007 biological regulation BP
GO:0090558 plant epidermis development BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF