Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr2.2473.g
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Position
Chr2:36454012-36456145 (-)
2133bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitin-related modifier
Organism
Juglans nigra
Also AS AT4G26840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr3.1019.g Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
Juni_Chr4.1238.g Belongs to the MCM family
Juni_Chr3.1355.g Pre-mRNA-splicing factor ATP-dependent RNA
Regulatory gene
Juni_Chr1.180.g Agamous-like MADS-box protein AGL12
Juni_Chr1.186.g Agamous-like MADS-box protein
Juni_Chr1.243.g Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.