Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr3.1192.g
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Position
Chr3:11032886-11037473 (-)
4587bp
Gene Type
gene
Gene Description (Protein Product)
CSC1-like protein ERD4
Organism
Juglans nigra
Also AS AT1G30360

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr6.355.g Short calmodulin-binding motif containing conserved Ile and Gln residues.
Juni_Chr7.445.g RPM1-interacting protein
Juni_Chr7.2634.g Belongs to the ubiquitin-conjugating enzyme family
Regulatory gene
Juni_Chr11.1944.g Protein BASIC PENTACYSTEINE6-like
Juni_Chr13.1575.g SNW SKI-interacting
Juni_Chr13.1579.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009941 chloroplast envelope CC
GO:0016020 membrane CC
GO:0030054 cell junction CC
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055044 symplast CC
GO:0071944 cell periphery CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC