Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr3.629.g
View in Genome Browser
Position
Chr3:5397638-5402679 (-)
5041bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ubiquitin-conjugating enzyme family
Organism
Juglans nigra
Also AS AT2G33770

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr9.1487.g Belongs to the ubiquitin-conjugating enzyme family
Juni_Chr5.760.g Belongs to the ubiquitin-conjugating enzyme family
Juni_Chr7.2329.g phosphate transporter
Regulatory gene
Juni_Chr1.103.g General transcription factor 3C polypeptide
Juni_Chr1.1171.g (NAC) domain-containing protein
Juni_Chr1.1211.g NAC transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006817 phosphate ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010966 regulation of phosphate transport BP
GO:0012505 endomembrane system CC
GO:0015698 inorganic anion transport BP
GO:0016036 cellular response to phosphate starvation BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019899 enzyme binding MF
GO:0030163 protein catabolic process BP
GO:0031625 ubiquitin protein ligase binding MF
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032879 regulation of localization BP
GO:0033554 cellular response to stress BP
GO:0034762 regulation of transmembrane transport BP
GO:0034765 regulation of monoatomic ion transmembrane transport BP
GO:0036211 protein modification process BP
GO:0042592 homeostatic process BP
GO:0042594 response to starvation BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043269 regulation of monoatomic ion transport BP
GO:0043412 macromolecule modification BP
GO:0044070 regulation of monoatomic anion transport BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044389 ubiquitin-like protein ligase binding MF
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051716 cellular response to stimulus BP
GO:0055062 phosphate ion homeostasis BP
GO:0055081 monoatomic anion homeostasis BP
GO:0055083 obsolete monovalent inorganic anion homeostasis BP
GO:0061630 ubiquitin protein ligase activity MF
GO:0061659 ubiquitin-like protein ligase activity MF
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0072505 obsolete divalent inorganic anion homeostasis BP
GO:0072506 obsolete trivalent inorganic anion homeostasis BP
GO:0098771 inorganic ion homeostasis BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1903795 regulation of inorganic anion transmembrane transport BP
GO:1903959 regulation of monoatomic anion transmembrane transport BP
GO:2000185 regulation of phosphate transmembrane transport BP
KEGG Term Name Description
map04120 Ubiquitin mediated proteolysis Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.