Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr3.912.g
View in Genome Browser
Position
Chr3:8173843-8176737 (+)
2894bp
Gene Type
gene
Gene Description (Protein Product)
Tryptophan synthase beta chain
Organism
Juglans nigra
Also AS AT5G28237

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr9.1637.g lactoylglutathione
Juni_SF041l2.8.g Serine acetyltransferase
Juni_Chr5.1449.g aminotransferase
Regulatory gene
Juni_Chr11.1944.g Protein BASIC PENTACYSTEINE6-like
Juni_Chr13.1575.g SNW SKI-interacting
Juni_Chr13.1579.g Protein BASIC PENTACYSTEINE2-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].