Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Juni_Chr5.922.g
View in Genome Browser
Position
Chr5:10577291-10586708 (+)
9417bp
Gene Type
gene
Gene Description (Protein Product)
homeobox-leucine zipper protein
Organism
Juglans nigra
Also AS AT5G60690

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Juni_Chr8.1431.g Myb-related protein Myb4-like
Juni_Chr9.423.g Transcription factor
Juni_Chr8.978.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Target gene
Juni_Chr1.1013.g two-component response regulator
Juni_Chr1.1017.g BAG family molecular chaperone regulator
Juni_Chr1.1031.g Inactive rhomboid protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0003002 regionalization BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009798 axis specification BP
GO:0009799 specification of symmetry BP
GO:0009855 determination of bilateral symmetry BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009933 meristem structural organization BP
GO:0009943 adaxial/abaxial axis specification BP
GO:0009944 polarity specification of adaxial/abaxial axis BP
GO:0009955 adaxial/abaxial pattern specification BP
GO:0009956 radial pattern formation BP
GO:0009987 cellular process BP
GO:0010014 meristem initiation BP
GO:0010051 xylem and phloem pattern formation BP
GO:0010087 phloem or xylem histogenesis BP
GO:0010089 xylem development BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048507 meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065001 specification of axis polarity BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP