PPGR - Gene Detail

Basic Information

Gene ID	Juni_Chr6.1511.g View in Genome Browser
Position	Chr6:25154589-25158756 (-) 4167bp
Gene Type	gene
Gene Description (Protein Product)	Enolase 1
Organism	Juglans nigra
Also AS	AT1G74030

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Juni_Chr9.894.g Belongs to the pyruvate kinase family

Juni_Chr7.2033.g Pyruvate phosphate dikinase

Juni_Chr6.881.g Belongs to the GPI family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000902	cell morphogenesis	BP
GO:0000904	cell morphogenesis involved in differentiation	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004634	phosphopyruvate hydratase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0008150	biological_process	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009653	anatomical structure morphogenesis	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009735	response to cytokinin	BP
GO:0009888	tissue development	BP
GO:0009987	cellular process	BP
GO:0010026	trichome differentiation	BP
GO:0010033	response to organic substance	BP
GO:0010090	trichome morphogenesis	BP
GO:0016043	cellular component organization	BP
GO:0016829	lyase activity	MF
GO:0016835	carbon-oxygen lyase activity	MF
GO:0016836	hydro-lyase activity	MF
GO:0030154	cell differentiation	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0042221	response to chemical	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048468	cell development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050896	response to stimulus	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090558	plant epidermis development	BP
GO:0090626	plant epidermis morphogenesis	BP

KEGG Term	Name	Description
map03018	RNA degradation	The correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay exist and both pathways are initiated by poly(A) shortening of the mRNA. In the 5' to 3' pathway, this is followed by decapping which then permits the 5' to 3' exonucleolytic degradation of transcripts. In the 3' to 5' pathway, the exosome, a large multisubunit complex, plays a key role. The exosome exists in archaeal cells, too. In bacteria, endoribonuclease E, a key enzyme involved in RNA decay and processing, organizes a protein complex called degradosome. RNase E or R interacts with the phosphate-dependent exoribonuclease polynucleotide phosphorylase, DEAD-box helicases, and additional factors in the RNA-degrading complex.
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00010	Glycolysis / Gluconeogenesis	Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].