PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Juni_Chr7.403.g View in Genome Browser
Position	Chr7:5155703-5158181 (+) 2478bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the glycosyl hydrolase 5 (cellulase A) family
Organism	Juglans nigra
Also AS	AT5G66460

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000272	polysaccharide catabolic process	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0004567	beta-mannosidase activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005623	obsolete cell	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0006950	response to stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009636	response to toxic substance	BP
GO:0009664	plant-type cell wall organization	BP
GO:0009791	post-embryonic development	BP
GO:0009827	plant-type cell wall modification	BP
GO:0009828	plant-type cell wall loosening	BP
GO:0009845	seed germination	BP
GO:0009900	dehiscence	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0010047	fruit dehiscence	BP
GO:0010154	fruit development	BP
GO:0010412	mannan metabolic process	BP
GO:0015923	mannosidase activity	MF
GO:0016043	cellular component organization	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0016985	mannan endo-1,4-beta-mannosidase activity	MF
GO:0016998	cell wall macromolecule catabolic process	BP
GO:0022414	reproductive process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032504	multicellular organism reproduction	BP
GO:0042221	response to chemical	BP
GO:0042545	cell wall modification	BP
GO:0043170	macromolecule metabolic process	BP
GO:0044036	cell wall macromolecule metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044247	cellular polysaccharide catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044275	cellular carbohydrate catabolic process	BP
GO:0044464	obsolete cell part	CC
GO:0045229	external encapsulating structure organization	BP
GO:0046355	mannan catabolic process	BP
GO:0046686	response to cadmium ion	BP
GO:0048046	apoplast	CC
GO:0048608	reproductive structure development	BP
GO:0048609	multicellular organismal reproductive process	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050896	response to stimulus	BP
GO:0061458	reproductive system development	BP
GO:0061687	detoxification of inorganic compound	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071555	cell wall organization	BP
GO:0071585	detoxification of cadmium ion	BP
GO:0071669	plant-type cell wall organization or biogenesis	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090351	seedling development	BP
GO:0097501	stress response to metal ion	BP
GO:0098754	detoxification	BP
GO:1901575	organic substance catabolic process	BP
GO:1990059	fruit valve development	BP
GO:1990170	stress response to cadmium ion	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00051	Fructose and mannose metabolism	-