PPGR - Gene Detail

Basic Information

Gene ID	Juni_Chr9.1467.g View in Genome Browser
Position	Chr9:20594610-20598826 (-) 4216bp
Gene Type	gene
Gene Description (Protein Product)	"Homogentisate 1
Organism	Juglans nigra
Also AS	AT5G54080

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Juni_Chr9.180.g Glutathione S-transferase zeta

Juni_Chr9.210.g Glutathione S-transferase zeta

Juni_Chr9.211.g Glutathione S-transferase zeta

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004411	homogentisate 1,2-dioxygenase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006570	tyrosine metabolic process	BP
GO:0006572	tyrosine catabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009063	amino acid catabolic process	BP
GO:0009072	aromatic amino acid metabolic process	BP
GO:0009074	aromatic amino acid family catabolic process	BP
GO:0009987	cellular process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	MF
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	MF
GO:0018958	phenol-containing compound metabolic process	BP
GO:0019336	phenol-containing compound catabolic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0051213	dioxygenase activity	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901606	alpha-amino acid catabolic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901616	organic hydroxy compound catabolic process	BP
GO:1901999	homogentisate metabolic process	BP
GO:1902000	homogentisate catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00350	Tyrosine metabolism	-