Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JreChr12G10987
View in Genome Browser
Position
chr12:21291059-21295042 (-)
3983bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class-I aminoacyl-tRNA synthetase family
Organism
Juglans regia
Also AS AT2G33840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JreChr13G11307 Lysyl-tRNA synthetase
JreChr12G11106 Peptidyl-tRNA hydrolase ICT1
JreChr12G11508 Domain of unknown function (DUF383)
Regulatory gene
JreChr01G10089 dof zinc finger protein
JreChr01G10237 Protein LHY-like isoform X1
JreChr01G10699 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004812 aminoacyl-tRNA ligase activity MF
GO:0004831 tyrosine-tRNA ligase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0006082 organic acid metabolic process BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006399 tRNA metabolic process BP
GO:0006412 translation BP
GO:0006418 tRNA aminoacylation for protein translation BP
GO:0006437 tyrosyl-tRNA aminoacylation BP
GO:0006518 peptide metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016597 amino acid binding MF
GO:0016874 ligase activity MF
GO:0016875 ligase activity, forming carbon-oxygen bonds MF
GO:0017076 purine nucleotide binding MF
GO:0019538 protein metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0030554 adenyl nucleotide binding MF
GO:0031406 carboxylic acid binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043038 amino acid activation BP
GO:0043039 tRNA aminoacylation BP
GO:0043043 peptide biosynthetic process BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043177 organic acid binding MF
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046983 protein dimerization activity MF
GO:0071704 organic substance metabolic process BP
GO:0072545 tyrosine binding MF
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0140098 catalytic activity, acting on RNA MF
GO:0140101 catalytic activity, acting on a tRNA MF
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map00970 Aminoacyl-tRNA biosynthesis -