Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
JreChr13G10070
View in Genome Browser
Position
chr13:10927928-10933524 (+)
5596bp
Gene Type
gene
Gene Description (Protein Product)
Carbamoyl-phosphate synthase large
Organism
Juglans regia
Also AS AT1G29900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JreChr16G10711 Glutamine--fructose-6-phosphate aminotransferase isomerizing
JreChr16G10449 dihydropyrimidine dehydrogenase
JreChr15G11287 dihydropyrimidine dehydrogenase
Regulatory gene
JreChr01G10089 dof zinc finger protein
JreChr01G10385 Zinc finger protein
JreChr01G11286 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000050 urea cycle BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004087 carbamoyl-phosphate synthase (ammonia) activity MF
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005951 carbamoyl-phosphate synthase complex CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006525 arginine metabolic process BP
GO:0006526 arginine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009267 cellular response to starvation BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0016020 membrane CC
GO:0016036 cellular response to phosphate starvation BP
GO:0016053 organic acid biosynthetic process BP
GO:0016874 ligase activity MF
GO:0016879 ligase activity, forming carbon-nitrogen bonds MF
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor MF
GO:0019627 urea metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071941 nitrogen cycle metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1902494 catalytic complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00250 Alanine, aspartate and glutamate metabolism -
map00240 Pyrimidine metabolism -