Basic Information
Gene ID
JsiChr05G10264.g
Position
chr5:2141457-2144925 (-)
3468bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the heat shock protein 70 family
Organism
Also AS AT5G09590

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JsiChr06G10059.g Protein SGT1 homolog
JsiChr12G11326.g Protein SGT1 homolog
JsiChr08G11205.g LETM1 and EF-hand domain-containing protein 1
Regulatory gene
JsiChr01G10114.g MADS-box transcription factor
JsiChr01G10578.g dof zinc finger protein
JsiChr01G10579.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03018 RNA degradation The correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay exist and both pathways are initiated by poly(A) shortening of the mRNA. In the 5' to 3' pathway, this is followed by decapping which then permits the 5' to 3' exonucleolytic degradation of transcripts. In the 3' to 5' pathway, the exosome, a large multisubunit complex, plays a key role. The exosome exists in archaeal cells, too. In bacteria, endoribonuclease E, a key enzyme involved in RNA decay and processing, organizes a protein complex called degradosome. RNase E or R interacts with the phosphate-dependent exoribonuclease polynucleotide phosphorylase, DEAD-box helicases, and additional factors in the RNA-degrading complex.