PPGR - Gene Detail

Gene ID	JsiChr06G10496.g View in Genome Browser
Position	chr6:5640178-5642807 (-) 2629bp
Gene Type	gene
Gene Description (Protein Product)	growth-regulating factor
Organism	Juglans sigillata
Also AS	AT4G37740

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	JsiChr07G11014.g grf1-interacting factor JsiChr08G11363.g grf1-interacting factor JsiChr16G10267.g Non-specific lipid-transfer protein-like
Regulatory gene	JsiChr05G11633.g Protein BASIC PENTACYSTEINE2-like JsiChr05G11638.g Protein BASIC PENTACYSTEINE2-like JsiChr06G10789.g Protein BASIC PENTACYSTEINE2-like
Target gene	JsiChr01G10058.g Boron transporter JsiChr01G10247.g JsiChr01G10258.g Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2- thiolation reaction by being thiocarboxylated (-COSH) at its C- terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009639	response to red or far red light	BP
GO:0010114	response to red light	BP
GO:0010218	response to far red light	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050896	response to stimulus	BP
GO:0080167	response to karrikin	BP
GO:0099402	plant organ development	BP