Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
JsiChr13G10152.g
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Position
chr13:23789028-23790005 (-)
977bp
Gene Type
gene
Gene Description (Protein Product)
Small nuclear
Organism
Juglans sigillata
Also AS AT5G44500

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JsiChr13G10398.g Sm-like protein LSM8
JsiChr13G12168.g Small nuclear ribonucleoprotein SM
JsiChr16G10521.g U6 snRNA-associated Sm-like protein
Regulatory gene
JsiChr01G10203.g Zinc finger protein
JsiChr01G10370.g ZINC FINGER protein
JsiChr01G10427.g lysine-specific demethylase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.