PPGR - Gene Detail

Basic Information

Gene ID	JsiChr13G12082.g View in Genome Browser
Position	chr13:16558009-16564776 (-) 6767bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Organism	Juglans sigillata
Also AS	AT5G45380

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

JsiChr15G11749.g agmatine

JsiChr16G10779.g Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit

JsiChr15G10134.g Belongs to the DHHC palmitoyltransferase family

Regulatory gene

JsiChr01G10437.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

JsiChr01G10578.g dof zinc finger protein

JsiChr01G10579.g dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0005887	plasma membrane	CC
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006812	monoatomic cation transport	BP
GO:0006950	response to stress	BP
GO:0006995	cellular response to nitrogen starvation	BP
GO:0007154	cell communication	BP
GO:0008150	biological_process	BP
GO:0008324	monoatomic cation transmembrane transporter activity	MF
GO:0008519	ammonium transmembrane transporter activity	MF
GO:0009267	cellular response to starvation	BP
GO:0009605	response to external stimulus	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015101	organic cation transmembrane transporter activity	MF
GO:0015203	polyamine transmembrane transporter activity	MF
GO:0015204	urea transmembrane transporter activity	MF
GO:0015291	secondary active transmembrane transporter activity	MF
GO:0015293	symporter activity	MF
GO:0015489	putrescine transmembrane transporter activity	MF
GO:0015606	spermidine transmembrane transporter activity	MF
GO:0015695	organic cation transport	BP
GO:0015696	ammonium transmembrane transport	BP
GO:0015840	urea transport	BP
GO:0015846	polyamine transport	BP
GO:0015847	putrescine transport	BP
GO:0015848	spermidine transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0019755	one-carbon compound transport	BP
GO:0022804	active transmembrane transporter activity	MF
GO:0022857	transmembrane transporter activity	MF
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031226	obsolete intrinsic component of plasma membrane	CC
GO:0031667	response to nutrient levels	BP
GO:0031668	cellular response to extracellular stimulus	BP
GO:0031669	cellular response to nutrient levels	BP
GO:0033554	cellular response to stress	BP
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0042594	response to starvation	BP
GO:0042886	amide transport	BP
GO:0042887	amide transmembrane transporter activity	MF
GO:0043562	cellular response to nitrogen levels	BP
GO:0044425	obsolete membrane part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051716	cellular response to stimulus	BP
GO:0055085	transmembrane transport	BP
GO:0071496	cellular response to external stimulus	BP
GO:0071702	organic substance transport	BP
GO:0071705	nitrogen compound transport	BP
GO:0071918	urea transmembrane transport	BP
GO:0071944	cell periphery	CC
GO:0072488	ammonium transmembrane transport	BP
GO:0098655	monoatomic cation transmembrane transport	BP
GO:1902047	polyamine transmembrane transport	BP
GO:1903711	spermidine transmembrane transport	BP