Basic Information
Gene ID
JsiChr14G11234.g
Position
chr14:13167233-13168687 (+)
1454bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Also AS AT2G41060

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JsiChr16G10480.g Cleavage stimulation factor
JsiChr15G12125.g RNA polymerase II subunit A C-terminal domain phosphatase
JsiChr16G10166.g Belongs to the cyclin family
Regulatory gene
JsiChr01G10064.g Tesmin/TSO1-like CXC domain
JsiChr01G10114.g MADS-box transcription factor
JsiChr01G10231.g ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.