Basic Information
Gene ID
JsiChr15G10382.g
Position
chr15:4444168-4446582 (-)
2414bp
Gene Type
gene
Gene Description (Protein Product)
PHAX RNA-binding domain
Organism
Also AS AT3G20430

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
JsiChr15G10981.g Nuclear pore complex protein
JsiChr15G11545.g Nuclear-pore
JsiChr15G11544.g Nuclear-pore anchor
Regulatory gene
JsiChr01G10114.g MADS-box transcription factor
JsiChr01G10578.g dof zinc finger protein
JsiChr01G10579.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.