Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi00251.g
View in Genome Browser
Position
Scaffold915:5817569-5830608 (+)
13039bp
Gene Type
gene
Gene Description (Protein Product)
plant mutator transposase zinc finger
Organism
Liriodendron chinense
Also AS AT1G10240

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi28755.g Belongs to the heat shock protein 70 family
Lchi28754.g Belongs to the heat shock protein 70 family
Lchi11721.g Hsp90 protein
Target gene
Lchi01449.g DNA mismatch repair protein
Lchi01451.g Cell number regulator
Lchi01847.g Protein virilizer homolog

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001671 ATPase activator activity MF
GO:0001932 regulation of protein phosphorylation BP
GO:0001933 negative regulation of protein phosphorylation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005788 endoplasmic reticulum lumen CC
GO:0006457 protein folding BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006915 apoptotic process BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008047 enzyme activator activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0010498 proteasomal protein catabolic process BP
GO:0010563 negative regulation of phosphorus metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0012501 programmed cell death BP
GO:0012505 endomembrane system CC
GO:0015035 protein-disulfide reductase activity MF
GO:0015036 disulfide oxidoreductase activity MF
GO:0016491 oxidoreductase activity MF
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors MF
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor MF
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0023052 signaling BP
GO:0030163 protein catabolic process BP
GO:0030234 enzyme regulator activity MF
GO:0030433 ubiquitin-dependent ERAD pathway BP
GO:0030544 Hsp70 protein binding MF
GO:0031072 heat shock protein binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031399 regulation of protein modification process BP
GO:0031400 negative regulation of protein modification process BP
GO:0031974 membrane-enclosed lumen CC
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032781 positive regulation of ATP-dependent activity BP
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034663 endoplasmic reticulum chaperone complex CC
GO:0034975 protein folding in endoplasmic reticulum BP
GO:0034976 response to endoplasmic reticulum stress BP
GO:0035556 intracellular signal transduction BP
GO:0036503 ERAD pathway BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0042326 negative regulation of phosphorylation BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043462 regulation of ATP-dependent activity BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045936 negative regulation of phosphate metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051087 chaperone binding MF
GO:0051117 ATPase binding MF
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051336 regulation of hydrolase activity BP
GO:0051345 positive regulation of hydrolase activity BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0051787 misfolded protein binding MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060589 nucleoside-triphosphatase regulator activity MF
GO:0060590 ATPase regulator activity MF
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0097190 apoptotic signaling pathway BP
GO:0097193 intrinsic apoptotic signaling pathway BP
GO:0098772 molecular function regulator activity MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901698 response to nitrogen compound BP
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.