Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi03822.g
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Position
Scaffold258:9082202-9123181 (+)
40979bp
Gene Type
gene
Gene Description (Protein Product)
General transcription factor IIE subunit
Organism
Liriodendron chinense
Also AS AT1G03280

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi26077.g Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase
Lchi13113.g DNA repair helicase
Lchi28640.g DNA repair helicase
Regulatory gene
Lchi02489.g transcription factor
Target gene
Lchi01080.g Alpha beta-Hydrolases superfamily protein
Lchi01081.g F-box protein
Lchi01083.g floral organ abscission

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03022 Basal transcription factors -