Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi09627.g
View in Genome Browser
Position
Scaffold984:3578530-3596380 (+)
17850bp
Gene Type
gene
Gene Description (Protein Product)
Autophagy-related protein
Organism
Liriodendron chinense
Also AS AT4G30790

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi15648.g Serine/Threonine protein kinases, catalytic domain
Lchi12875.g serine threonine-protein kinase
Lchi16598.g serine threonine-protein kinase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000272 polysaccharide catabolic process BP
GO:0000407 phagophore assembly site CC
GO:0000422 autophagy of mitochondrion BP
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005776 autophagosome CC
GO:0005911 cell-cell junction CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0005977 glycogen metabolic process BP
GO:0005980 glycogen catabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0006091 generation of precursor metabolites and energy BP
GO:0006112 energy reserve metabolic process BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007033 vacuole organization BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009251 glucan catabolic process BP
GO:0009506 plasmodesma CC
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010150 leaf senescence BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0015980 energy derivation by oxidation of organic compounds BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016052 carbohydrate catabolic process BP
GO:0016236 macroautophagy BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0022411 cellular component disassembly BP
GO:0022607 cellular component assembly BP
GO:0030054 cell junction CC
GO:0030242 autophagy of peroxisome BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032947 molecular adaptor activity MF
GO:0032991 protein-containing complex CC
GO:0034045 phagophore assembly site membrane CC
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044042 glucan metabolic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044247 cellular polysaccharide catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044275 cellular carbohydrate catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0046983 protein dimerization activity MF
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0055044 symplast CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0061709 reticulophagy BP
GO:0061723 glycophagy BP
GO:0061726 mitochondrion disassembly BP
GO:0061912 selective autophagy BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065007 biological regulation BP
GO:0070925 organelle assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090693 plant organ senescence BP
GO:0098805 membrane CC
GO:0099402 plant organ development BP
GO:1901575 organic substance catabolic process BP
GO:1902494 catalytic complex CC
GO:1902554 serine/threonine protein kinase complex CC
GO:1902911 protein kinase complex CC
GO:1903008 organelle disassembly BP
GO:1905037 autophagosome organization BP
GO:1990234 transferase complex CC
GO:1990316 Atg1/ULK1 kinase complex CC