Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi16129.g
View in Genome Browser
Position
Scaffold369:4573131-4596315 (+)
23184bp
Gene Type
gene
Gene Description (Protein Product)
Tetrapyrrole-binding protein
Organism
Liriodendron chinense
Also AS AT3G07480

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi20216.g Phytochromobilin ferredoxin oxidoreductase
Lchi27970.g Magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
Lchi22841.g UPF0603 protein At1g54780
Regulatory gene
Lchi00695.g transcription factor
Lchi00798.g ZINC FINGER protein
Lchi01150.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006779 porphyrin-containing compound biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0010019 chloroplast-nucleus signaling pathway BP
GO:0015994 chlorophyll metabolic process BP
GO:0015995 chlorophyll biosynthetic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019899 enzyme binding MF
GO:0023052 signaling BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0033014 tetrapyrrole biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042440 pigment metabolic process BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046906 tetrapyrrole binding MF
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071704 organic substance metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP