Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi18762.g
View in Genome Browser
Position
Scaffold2411:729852-743196 (-)
13344bp
Gene Type
gene
Gene Description (Protein Product)
protein required for chloroplast accumulation response
Organism
Liriodendron chinense
Also AS AT1G75100

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi35354.g Glycine-rich RNA-binding protein
Lchi34220.g Glycine-rich RNA-binding protein
Lchi26455.g Glycine-rich RNA-binding protein
Regulatory gene
Lchi02489.g transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007015 actin filament organization BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009902 chloroplast relocation BP
GO:0009903 chloroplast avoidance movement BP
GO:0009904 chloroplast accumulation movement BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019750 chloroplast localization BP
GO:0030029 actin filament-based process BP
GO:0030036 actin cytoskeleton organization BP
GO:0031982 vesicle CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051644 plastid localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0051667 establishment of plastid localization BP
GO:0051716 cellular response to stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071483 cellular response to blue light BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097435 supramolecular fiber organization BP
GO:0098657 import into cell BP
GO:0104004 cellular response to environmental stimulus BP