Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi19167.g
View in Genome Browser
Position
Scaffold3004:93041-102815 (+)
9774bp
Gene Type
gene
Gene Description (Protein Product)
Biotin/lipoate A/B protein ligase family
Organism
Liriodendron chinense
Also AS AT1G04640

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi28800.g Belongs to the beta-ketoacyl-ACP synthases family
Lchi24032.g Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Lchi22560.g Plays an essential role in chain termination during de novo fatty acid synthesis
Regulatory gene
Lchi01587.g MADS-box transcription factor
Lchi01744.g Floral homeotic protein
Lchi02285.g MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009249 protein lipoylation BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups MF
GO:0018065 obsolete protein-cofactor linkage BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0019538 protein metabolic process BP
GO:0033819 lipoyl(octanoyl) transferase activity MF
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051604 protein maturation BP
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00785 Lipoic acid metabolism -