PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Lchi19676.g View in Genome Browser
Position	Scaffold2795:957571-965601 (-) 8030bp
Gene Type	gene
Gene Description (Protein Product)	"GTP diphosphokinase RSH2
Organism	Liriodendron chinense
Also AS	AT1G54130

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Lchi23407.g riboflavin biosynthesis protein Lchi32371.g Belongs to the GDA1 CD39 NTPase family Lchi20771.g Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
Regulatory gene	Lchi02489.g transcription factor Lchi03252.g AP2-like ethylene-responsive transcription factor AIL5 Lchi13837.g AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005886	plasma membrane	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006164	purine nucleotide biosynthetic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0007275	multicellular organism development	BP
GO:0007568	aging	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008728	GTP diphosphokinase activity	MF
GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009116	nucleoside metabolic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009119	ribonucleoside metabolic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009152	purine ribonucleotide biosynthetic process	BP
GO:0009163	nucleoside biosynthetic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009605	response to external stimulus	BP
GO:0009611	response to wounding	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0010033	response to organic substance	BP
GO:0010150	leaf senescence	BP
GO:0015969	guanosine tetraphosphate metabolic process	BP
GO:0015970	guanosine tetraphosphate biosynthetic process	BP
GO:0015979	photosynthesis	BP
GO:0016020	membrane	CC
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016778	diphosphotransferase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0016794	diphosphoric monoester hydrolase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0030312	external encapsulating structure	CC
GO:0031667	response to nutrient levels	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0033865	nucleoside bisphosphate metabolic process	BP
GO:0033866	nucleoside bisphosphate biosynthetic process	BP
GO:0033875	ribonucleoside bisphosphate metabolic process	BP
GO:0033993	response to lipid	BP
GO:0034030	ribonucleoside bisphosphate biosynthetic process	BP
GO:0034032	purine nucleoside bisphosphate metabolic process	BP
GO:0034033	purine nucleoside bisphosphate biosynthetic process	BP
GO:0034035	purine ribonucleoside bisphosphate metabolic process	BP
GO:0034036	purine ribonucleoside bisphosphate biosynthetic process	BP
GO:0034404	nucleobase-containing small molecule biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0042221	response to chemical	BP
GO:0042278	purine nucleoside metabolic process	BP
GO:0042451	purine nucleoside biosynthetic process	BP
GO:0042455	ribonucleoside biosynthetic process	BP
GO:0042578	phosphoric ester hydrolase activity	MF
GO:0042594	response to starvation	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046128	purine ribonucleoside metabolic process	BP
GO:0046129	purine ribonucleoside biosynthetic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050896	response to stimulus	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0072521	purine-containing compound metabolic process	BP
GO:0072522	purine-containing compound biosynthetic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0090693	plant organ senescence	BP
GO:0097305	response to alcohol	BP
GO:0099402	plant organ development	BP
GO:1901068	guanosine-containing compound metabolic process	BP
GO:1901070	guanosine-containing compound biosynthetic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901657	glycosyl compound metabolic process	BP
GO:1901659	glycosyl compound biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00230	Purine metabolism	-