Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi20222.g
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Position
Scaffold1219:333769-355943 (+)
22174bp
Gene Type
gene
Gene Description (Protein Product)
2-oxoisovalerate dehydrogenase subunit beta
Organism
Liriodendron chinense
Also AS AT1G55510

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi28800.g Belongs to the beta-ketoacyl-ACP synthases family
Lchi33588.g Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Lchi20798.g Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Regulatory gene
Lchi14379.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009063 amino acid catabolic process BP
GO:0009081 branched-chain amino acid metabolic process BP
GO:0009083 branched-chain amino acid catabolic process BP
GO:0009267 cellular response to starvation BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009642 response to light intensity BP
GO:0009646 response to absence of light BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0016054 organic acid catabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0030062 mitochondrial tricarboxylic acid cycle enzyme complex CC
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0031974 membrane-enclosed lumen CC
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034285 response to disaccharide BP
GO:0042221 response to chemical BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043436 oxoacid metabolic process BP
GO:0043617 cellular response to sucrose starvation BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045239 tricarboxylic acid cycle enzyme complex CC
GO:0045240 dihydrolipoyl dehydrogenase complex CC
GO:0046395 carboxylic acid catabolic process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0070013 intracellular organelle lumen CC
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0098798 mitochondrial protein-containing complex CC
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902494 catalytic complex CC
GO:1990204 oxidoreductase complex CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00780 Biotin metabolism -
map00640 Propanoate metabolism -
map00280 Valine, leucine and isoleucine degradation -
map00061 Fatty acid biosynthesis -