Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi20407.g
View in Genome Browser
Position
Scaffold72:2217239-2247175 (-)
29936bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the AAA ATPase family
Organism
Liriodendron chinense
Also AS AT3G27120

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi25707.g Domain of unknown function (DUF4487)
Lchi25560.g centromere protein
Lchi24170.g 3'-5' exonuclease

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000018 regulation of DNA recombination BP
GO:0000228 nuclear chromosome CC
GO:0000280 nuclear division BP
GO:0000287 magnesium ion binding MF
GO:0001503 ossification BP
GO:0001649 osteoblast differentiation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006163 purine nucleotide metabolic process BP
GO:0006282 regulation of DNA repair BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007140 male meiotic nuclear division BP
GO:0007276 gamete generation BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008283 cell population proliferation BP
GO:0009117 nucleotide metabolic process BP
GO:0009123 nucleoside monophosphate metabolic process BP
GO:0009126 purine nucleoside monophosphate metabolic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009144 purine nucleoside triphosphate metabolic process BP
GO:0009150 purine ribonucleotide metabolic process BP
GO:0009161 ribonucleoside monophosphate metabolic process BP
GO:0009167 purine ribonucleoside monophosphate metabolic process BP
GO:0009199 ribonucleoside triphosphate metabolic process BP
GO:0009205 purine ribonucleoside triphosphate metabolic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009314 response to radiation BP
GO:0009628 response to abiotic stimulus BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010212 response to ionizing radiation BP
GO:0010520 regulation of reciprocal meiotic recombination BP
GO:0010564 regulation of cell cycle process BP
GO:0010569 regulation of double-strand break repair via homologous recombination BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010639 negative regulation of organelle organization BP
GO:0010941 regulation of cell death BP
GO:0010948 negative regulation of cell cycle process BP
GO:0016043 cellular component organization BP
GO:0016787 hydrolase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0033043 regulation of organelle organization BP
GO:0033687 osteoblast proliferation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0040020 regulation of meiotic nuclear division BP
GO:0042981 regulation of apoptotic process BP
GO:0043066 negative regulation of apoptotic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0045128 negative regulation of reciprocal meiotic recombination BP
GO:0045786 negative regulation of cell cycle BP
GO:0045835 negative regulation of meiotic nuclear division BP
GO:0045910 negative regulation of DNA recombination BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0046034 ATP metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046872 metal ion binding MF
GO:0048232 male gamete generation BP
GO:0048285 organelle fission BP
GO:0048471 perinuclear region of cytoplasm CC
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051052 regulation of DNA metabolic process BP
GO:0051053 negative regulation of DNA metabolic process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051321 meiotic cell cycle BP
GO:0051445 regulation of meiotic cell cycle BP
GO:0051447 negative regulation of meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0051784 negative regulation of nuclear division BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060548 negative regulation of cell death BP
GO:0060631 regulation of meiosis I BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071479 cellular response to ionizing radiation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072521 purine-containing compound metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0104004 cellular response to environmental stimulus BP
GO:0110029 negative regulation of meiosis I BP
GO:0140013 meiotic nuclear division BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1903046 meiotic cell cycle process BP
GO:2000241 regulation of reproductive process BP
GO:2000242 negative regulation of reproductive process BP
GO:2000779 regulation of double-strand break repair BP
GO:2001020 regulation of response to DNA damage stimulus BP