Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi21277.g
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Position
Scaffold227:1467875-1479654 (-)
11779bp
Gene Type
gene
Gene Description (Protein Product)
Protein ROOT INITIATION DEFECTIVE
Organism
Liriodendron chinense
Also AS AT3G49180

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi25444.g May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays
Lchi26098.g Tho complex subunit
Lchi23170.g WD repeat-containing protein
Regulatory gene
Lchi01587.g MADS-box transcription factor
Lchi01682.g Zinc-finger homeodomain protein
Lchi01744.g Floral homeotic protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0008150 biological_process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048509 regulation of meristem development BP
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051093 negative regulation of developmental process BP
GO:0065007 biological regulation BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:1902183 regulation of shoot apical meristem development BP
GO:1902184 negative regulation of shoot apical meristem development BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC