Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi21737.g
View in Genome Browser
Position
Scaffold492:937647-950840 (-)
13193bp
Gene Type
gene
Gene Description (Protein Product)
"Acts as subunit of the RNA polymerase II elongator complex
Organism
Liriodendron chinense
Also AS AT5G13680

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi21948.g Elongator complex protein
Lchi21769.g Elongator complex protein
Lchi22895.g Very-long-chain enoyl-CoA
Regulatory gene
Lchi00878.g transcription factor
Lchi01186.g Protein BASIC PENTACYSTEINE7-like
Lchi01531.g Transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001101 response to acid chemical BP
GO:0001510 RNA methylation BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006400 tRNA modification BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007275 multicellular organism development BP
GO:0008033 tRNA processing BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008283 cell population proliferation BP
GO:0008284 positive regulation of cell population proliferation BP
GO:0009451 RNA modification BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009892 negative regulation of metabolic process BP
GO:0009965 leaf morphogenesis BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010016 shoot system morphogenesis BP
GO:0010033 response to organic substance BP
GO:0010154 fruit development BP
GO:0010467 gene expression BP
GO:0010646 regulation of cell communication BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0016070 RNA metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0023051 regulation of signaling BP
GO:0030488 tRNA methylation BP
GO:0031537 regulation of anthocyanin metabolic process BP
GO:0031538 negative regulation of anthocyanin metabolic process BP
GO:0032259 methylation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0032991 protein-containing complex CC
GO:0033588 elongator holoenzyme complex CC
GO:0033993 response to lipid BP
GO:0034470 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035265 organ growth BP
GO:0040007 growth BP
GO:0042127 regulation of cell population proliferation BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043414 macromolecule methylation BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048530 fruit morphogenesis BP
GO:0048583 regulation of response to stimulus BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051716 cellular response to stimulus BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071215 cellular response to abscisic acid stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071310 cellular response to organic substance BP
GO:0071396 cellular response to lipid BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0080178 5-carbamoylmethyl uridine residue modification BP
GO:0090304 nucleic acid metabolic process BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0097305 response to alcohol BP
GO:0097306 cellular response to alcohol BP
GO:0099402 plant organ development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901419 regulation of response to alcohol BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1905392 plant organ morphogenesis BP
GO:1905957 regulation of cellular response to alcohol BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP