Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Lchi25827.g
View in Genome Browser
Position
Scaffold1284:1730729-1731869 (+)
1140bp
Gene Type
gene
Gene Description (Protein Product)
lob domain-containing protein
Organism
Liriodendron chinense
Also AS AT2G30130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi28067.g Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1
Lchi29299.g Belongs to the GRAS family
Lchi29837.g Xanthoxin
Regulatory gene
Lchi00695.g transcription factor
Lchi01150.g Transcription factor
Lchi01912.g Transcription factor
Target gene
Lchi01138.g Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
Lchi01168.g zinc finger, C3HC4 type domain containing protein, expressed
Lchi01224.g histone acetyl-transferase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)