Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi27301.g
View in Genome Browser
Position
Scaffold131:120621-155448 (-)
34827bp
Gene Type
gene
Gene Description (Protein Product)
MATH domain-containing protein
Organism
Liriodendron chinense
Also AS AT5G43560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi30034.g Transcription elongation factor Spt5
Lchi29831.g chromodomain-helicase-DNA-binding protein
Lchi27393.g DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Regulatory gene
Lchi02396.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Lchi03252.g AP2-like ethylene-responsive transcription factor AIL5
Lchi07355.g B3 domain-containing

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002376 immune system process BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006914 autophagy BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016236 macroautophagy BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0050896 response to stimulus BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:1905037 autophagosome organization BP