Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi30487.g
View in Genome Browser
Position
Scaffold3325:45756-64237 (-)
18481bp
Gene Type
gene
Gene Description (Protein Product)
RING-type E3 ubiquitin transferase
Organism
Liriodendron chinense
Also AS AT3G49810

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi32469.g RING-type E3 ubiquitin transferase
Lchi33268.g Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Lchi32969.g -
Regulatory gene
Lchi01186.g Protein BASIC PENTACYSTEINE7-like
Lchi02489.g transcription factor
Lchi05779.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010646 regulation of cell communication BP
GO:0016020 membrane CC
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0023051 regulation of signaling BP
GO:0032446 protein modification by small protein conjugation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044464 obsolete cell part CC
GO:0048583 regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0061630 ubiquitin protein ligase activity MF
GO:0061659 ubiquitin-like protein ligase activity MF
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1900457 regulation of brassinosteroid mediated signaling pathway BP
GO:1901564 organonitrogen compound metabolic process BP