PPGR - Gene Detail

Gene ID	Lchi30599.g View in Genome Browser
Position	Scaffold1025:195447-214871 (-) 19424bp
Gene Type	gene
Gene Description (Protein Product)	AT-hook motif nuclear-localized protein
Organism	Liriodendron chinense
Also AS	AT4G12080

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulatory gene

Lchi14379.g dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003680	minor groove of adenine-thymine-rich DNA binding	MF
GO:0003690	double-stranded DNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005654	nucleoplasm	CC
GO:0005694	chromosome	CC
GO:0005730	nucleolus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0070013	intracellular organelle lumen	CC
GO:0097159	organic cyclic compound binding	MF
GO:0098687	chromosomal region	CC
GO:1901363	heterocyclic compound binding	MF
GO:1990837	sequence-specific double-stranded DNA binding	MF