Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi32573.g
View in Genome Browser
Position
Scaffold113:66745-73379 (+)
6634bp
Gene Type
gene
Gene Description (Protein Product)
RAB GTPase homolog
Organism
Liriodendron chinense
Also AS AT5G10260

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi35351.g Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Lchi33654.g Golgi membrane protein involved in vesicular trafficking
Lchi33373.g Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain
Regulatory gene
Lchi00798.g ZINC FINGER protein
Lchi01186.g Protein BASIC PENTACYSTEINE7-like
Lchi01564.g transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0006810 transport BP
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum BP
GO:0006891 intra-Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016482 cytosolic transport BP
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP