Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Lchi32925.g
View in Genome Browser
Position
Scaffold446:33895-45570 (-)
11675bp
Gene Type
gene
Gene Description (Protein Product)
arbuscular mycorrhizal association
Organism
Liriodendron chinense
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Lchi33243.g transcription factor
Regulatory gene
Lchi00930.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
Lchi08934.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
Lchi14379.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0009877 nodulation BP
GO:0036377 arbuscular mycorrhizal association BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0051704 obsolete multi-organism process BP